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pubmed-article:17174003rdf:typepubmed:Citationlld:pubmed
pubmed-article:17174003lifeskim:mentionsumls-concept:C1710082lld:lifeskim
pubmed-article:17174003lifeskim:mentionsumls-concept:C0024487lld:lifeskim
pubmed-article:17174003lifeskim:mentionsumls-concept:C1709694lld:lifeskim
pubmed-article:17174003pubmed:issue2lld:pubmed
pubmed-article:17174003pubmed:dateCreated2007-1-22lld:pubmed
pubmed-article:17174003pubmed:abstractTextMagnetic resonance spectroscopy (MRS) can be used to determine in a non-invasive way the concentrations of certain chemical substances, also called metabolites. The spectra of MRS signals contain peaks that correspond to the metabolites of interest. Short-echo-time signals are characterized by heavily overlapping metabolite peaks and require sophisticated processing methods. To be useful in a clinical environment tools are needed that can process those signals in an accurate and fast way. Therefore, we developed novel processing methods and we designed a freely available and open-source framework (http://www.esat.kuleuven.ac.be/sista/members/biomed) in which the processing methods can be integrated. The framework has a set of abstract classes, called hot spots, and its goal is to provide a general structure and determine the control flow of the program. It provides building blocks or components in order to help developers with integrating their methods in the framework via a plug-in system. The framework is designed with the unified modeling language (UML) and implemented in Java. When a developer implements the framework he gets an application that acts like a simple and user-friendly graphical user interface (GUI) for processing MRS data. This article describes in detail the structure and implementation of the framework and the integration of our processing methods in it.lld:pubmed
pubmed-article:17174003pubmed:languageenglld:pubmed
pubmed-article:17174003pubmed:journalhttp://linkedlifedata.com/r...lld:pubmed
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pubmed-article:17174003pubmed:statusMEDLINElld:pubmed
pubmed-article:17174003pubmed:monthFeblld:pubmed
pubmed-article:17174003pubmed:issn0169-2607lld:pubmed
pubmed-article:17174003pubmed:authorpubmed-author:PENGS YSYlld:pubmed
pubmed-article:17174003pubmed:authorpubmed-author:VanhammeLLlld:pubmed
pubmed-article:17174003pubmed:authorpubmed-author:Van HuffelSSlld:pubmed
pubmed-article:17174003pubmed:authorpubmed-author:LemmerlingPPlld:pubmed
pubmed-article:17174003pubmed:authorpubmed-author:De NeuterBBlld:pubmed
pubmed-article:17174003pubmed:issnTypePrintlld:pubmed
pubmed-article:17174003pubmed:volume85lld:pubmed
pubmed-article:17174003pubmed:ownerNLMlld:pubmed
pubmed-article:17174003pubmed:authorsCompleteYlld:pubmed
pubmed-article:17174003pubmed:pagination129-37lld:pubmed
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pubmed-article:17174003pubmed:meshHeadingpubmed-meshheading:17174003...lld:pubmed
pubmed-article:17174003pubmed:year2007lld:pubmed
pubmed-article:17174003pubmed:articleTitleJava-based framework for processing and displaying short-echo-time magnetic resonance spectroscopy signals.lld:pubmed
pubmed-article:17174003pubmed:affiliationKatholieke Universiteit Leuven, Department Electrical Engineering, ESAT-SCD, Belgium.lld:pubmed
pubmed-article:17174003pubmed:publicationTypeJournal Articlelld:pubmed
pubmed-article:17174003pubmed:publicationTypeResearch Support, Non-U.S. Gov'tlld:pubmed