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pubmed-article:17169155pubmed:abstractTextThe duration of treatment for HCV infection is partly indicated by the genotype of the virus. For studies of disease transmission, vaccine design, and surveillance for novel variants, subtype-level classification is also needed. This study used the Shimodaira-Hasegawa test and related statistical techniques to compare phylogenetic trees obtained from coding and non-coding regions of a whole-genome alignment for the reliability of subtyping in different regions.lld:pubmed
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pubmed-article:17169155pubmed:articleTitleComparative analysis of hepatitis C virus phylogenies from coding and non-coding regions: the 5' untranslated region (UTR) fails to classify subtypes.lld:pubmed
pubmed-article:17169155pubmed:affiliationTheoretical Biology and Biophysics, T-10 MS K710, Los Alamos National Laboratory, Los Alamos NM 87545, USA. phraber@lanl.govlld:pubmed
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