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pubmed-article:16009941pubmed:abstractTextPhi values are experimental measures of how the kinetics of protein folding is changed by single-site mutations. Phi values measure energetic quantities, but they are often interpreted in terms of the structures of the transition-state ensemble. Here, we describe a simple analytical model of the folding kinetics in terms of the formation of protein substructures. The model shows that Phi values have both structural and energetic components. It also provides a natural and general interpretation of "nonclassical" Phi values (i.e., < 0 or > 1). The model reproduces the Phi values for 20 single-residue mutations in the alpha-helix of the protein CI2, including several nonclassical Phi values, in good agreement with experiments.lld:pubmed
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pubmed-article:16009941pubmed:authorpubmed-author:DillKen AKAlld:pubmed
pubmed-article:16009941pubmed:authorpubmed-author:WeiklThomas...lld:pubmed
pubmed-article:16009941pubmed:authorpubmed-author:MerloClaudiaClld:pubmed
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pubmed-article:16009941pubmed:pagination10171-5lld:pubmed
pubmed-article:16009941pubmed:dateRevised2009-11-18lld:pubmed
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pubmed-article:16009941pubmed:articleTitlePhi values in protein-folding kinetics have energetic and structural components.lld:pubmed
pubmed-article:16009941pubmed:affiliationMax Planck Institute of Colloids and Interfaces, Theory Division, 14424 Potsdam, Germany.lld:pubmed
pubmed-article:16009941pubmed:publicationTypeJournal Articlelld:pubmed
pubmed-article:16009941pubmed:publicationTypeComparative Studylld:pubmed
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