| pubmed-article:15878123 | rdf:type | pubmed:Citation | lld:pubmed |
| pubmed-article:15878123 | lifeskim:mentions | umls-concept:C1519249 | lld:lifeskim |
| pubmed-article:15878123 | lifeskim:mentions | umls-concept:C0242356 | lld:lifeskim |
| pubmed-article:15878123 | lifeskim:mentions | umls-concept:C0150098 | lld:lifeskim |
| pubmed-article:15878123 | lifeskim:mentions | umls-concept:C0205257 | lld:lifeskim |
| pubmed-article:15878123 | lifeskim:mentions | umls-concept:C2698651 | lld:lifeskim |
| pubmed-article:15878123 | pubmed:issue | 3 | lld:pubmed |
| pubmed-article:15878123 | pubmed:dateCreated | 2005-5-9 | lld:pubmed |
| pubmed-article:15878123 | pubmed:abstractText | We introduce a new method for identifying optimal incomplete data sets from large sequence databases based on the graph theoretic concept of alpha-quasi-bicliques. The quasi-biclique method searches large sequence databases to identify useful phylogenetic data sets with a specified amount of missing data while maintaining the necessary amount of overlap among genes and taxa. The utility of the quasi-biclique method is demonstrated on large simulated sequence databases and on a data set of green plant sequences from GenBank. The quasi-biclique method greatly increases the taxon and gene sampling in the data sets while adding only a limited amount of missing data. Furthermore, under the conditions of the simulation, data sets with a limited amount of missing data often produce topologies nearly as accurate as those built from complete data sets. The quasi-biclique method will be an effective tool for exploiting sequence databases for phylogenetic information and also may help identify critical sequences needed to build large phylogenetic data sets. | lld:pubmed |
| pubmed-article:15878123 | pubmed:language | eng | lld:pubmed |
| pubmed-article:15878123 | pubmed:journal | http://linkedlifedata.com/r... | lld:pubmed |
| pubmed-article:15878123 | pubmed:citationSubset | IM | lld:pubmed |
| pubmed-article:15878123 | pubmed:status | MEDLINE | lld:pubmed |
| pubmed-article:15878123 | pubmed:month | Jun | lld:pubmed |
| pubmed-article:15878123 | pubmed:issn | 1055-7903 | lld:pubmed |
| pubmed-article:15878123 | pubmed:author | pubmed-author:EulensteinOli... | lld:pubmed |
| pubmed-article:15878123 | pubmed:author | pubmed-author:BurleighJ... | lld:pubmed |
| pubmed-article:15878123 | pubmed:author | pubmed-author:YanChanghuiC | lld:pubmed |
| pubmed-article:15878123 | pubmed:issnType | Print | lld:pubmed |
| pubmed-article:15878123 | pubmed:volume | 35 | lld:pubmed |
| pubmed-article:15878123 | pubmed:owner | NLM | lld:pubmed |
| pubmed-article:15878123 | pubmed:authorsComplete | Y | lld:pubmed |
| pubmed-article:15878123 | pubmed:pagination | 528-35 | lld:pubmed |
| pubmed-article:15878123 | pubmed:dateRevised | 2006-11-15 | lld:pubmed |
| pubmed-article:15878123 | pubmed:meshHeading | pubmed-meshheading:15878123... | lld:pubmed |
| pubmed-article:15878123 | pubmed:meshHeading | pubmed-meshheading:15878123... | lld:pubmed |
| pubmed-article:15878123 | pubmed:meshHeading | pubmed-meshheading:15878123... | lld:pubmed |
| pubmed-article:15878123 | pubmed:meshHeading | pubmed-meshheading:15878123... | lld:pubmed |
| pubmed-article:15878123 | pubmed:meshHeading | pubmed-meshheading:15878123... | lld:pubmed |
| pubmed-article:15878123 | pubmed:meshHeading | pubmed-meshheading:15878123... | lld:pubmed |
| pubmed-article:15878123 | pubmed:year | 2005 | lld:pubmed |
| pubmed-article:15878123 | pubmed:articleTitle | Identifying optimal incomplete phylogenetic data sets from sequence databases. | lld:pubmed |
| pubmed-article:15878123 | pubmed:affiliation | Department of Computer Science, Iowa State University, Ames, IA 50011, USA. | lld:pubmed |
| pubmed-article:15878123 | pubmed:publicationType | Journal Article | lld:pubmed |
| pubmed-article:15878123 | pubmed:publicationType | Comparative Study | lld:pubmed |
| pubmed-article:15878123 | pubmed:publicationType | Research Support, U.S. Gov't, Non-P.H.S. | lld:pubmed |
| http://linkedlifedata.com/r... | pubmed:referesTo | pubmed-article:15878123 | lld:pubmed |
| http://linkedlifedata.com/r... | pubmed:referesTo | pubmed-article:15878123 | lld:pubmed |
| http://linkedlifedata.com/r... | pubmed:referesTo | pubmed-article:15878123 | lld:pubmed |
| http://linkedlifedata.com/r... | pubmed:referesTo | pubmed-article:15878123 | lld:pubmed |
