| pubmed-article:15008812 | rdf:type | pubmed:Citation | lld:pubmed |
| pubmed-article:15008812 | lifeskim:mentions | umls-concept:C0318075 | lld:lifeskim |
| pubmed-article:15008812 | lifeskim:mentions | umls-concept:C0020202 | lld:lifeskim |
| pubmed-article:15008812 | lifeskim:mentions | umls-concept:C0205147 | lld:lifeskim |
| pubmed-article:15008812 | lifeskim:mentions | umls-concept:C0017428 | lld:lifeskim |
| pubmed-article:15008812 | lifeskim:mentions | umls-concept:C1328887 | lld:lifeskim |
| pubmed-article:15008812 | lifeskim:mentions | umls-concept:C0060122 | lld:lifeskim |
| pubmed-article:15008812 | pubmed:issue | 4 | lld:pubmed |
| pubmed-article:15008812 | pubmed:dateCreated | 2004-3-10 | lld:pubmed |
| pubmed-article:15008812 | pubmed:abstractText | Two closely related strains of the Gram-positive, cellulolytic ruminal bacterium Ruminococcus flavefaciens were compared at the genomic level by suppressive subtractive hybridization. The two strains investigated in this study differ by 1.94% in their respective 16S rDNA genes. Three hundred and eighty-four PCR-amplified products were cloned and then screened for their strain identity by dot blot hybridization. Based on redundancy percentages of the clones sequenced, 9.5% of the genome of the R. flavefaciens FD-1 strain is not present in the JM1 strain. The majority of identities of individual cloned subtracted products (642 bp average length) bore no relation to deposited sequences in GenBank (42% of the subtracted library), whereas of those with putative assigned functions 7% are loosely associated with fibre-degradation, 6% with insertion elements, transposons and phage-like ORFs, 5% with cell membrane associated proteins and 3% with signal transduction. Subtracted sequences were then supplemented with the draft (2 x coverage) genome sequence of R. flavefaciens FD-1 to indicate potential regions of rearrangement within the genome, including a novel insertion sequence. | lld:pubmed |
| pubmed-article:15008812 | pubmed:language | eng | lld:pubmed |
| pubmed-article:15008812 | pubmed:journal | http://linkedlifedata.com/r... | lld:pubmed |
| pubmed-article:15008812 | pubmed:citationSubset | IM | lld:pubmed |
| pubmed-article:15008812 | pubmed:chemical | http://linkedlifedata.com/r... | lld:pubmed |
| pubmed-article:15008812 | pubmed:chemical | http://linkedlifedata.com/r... | lld:pubmed |
| pubmed-article:15008812 | pubmed:chemical | http://linkedlifedata.com/r... | lld:pubmed |
| pubmed-article:15008812 | pubmed:status | MEDLINE | lld:pubmed |
| pubmed-article:15008812 | pubmed:month | Apr | lld:pubmed |
| pubmed-article:15008812 | pubmed:issn | 1462-2912 | lld:pubmed |
| pubmed-article:15008812 | pubmed:author | pubmed-author:MorrisonMarkM | lld:pubmed |
| pubmed-article:15008812 | pubmed:author | pubmed-author:NelsonKaren... | lld:pubmed |
| pubmed-article:15008812 | pubmed:author | pubmed-author:WhiteBryan... | lld:pubmed |
| pubmed-article:15008812 | pubmed:author | pubmed-author:AntonopoulosD... | lld:pubmed |
| pubmed-article:15008812 | pubmed:issnType | Print | lld:pubmed |
| pubmed-article:15008812 | pubmed:volume | 6 | lld:pubmed |
| pubmed-article:15008812 | pubmed:owner | NLM | lld:pubmed |
| pubmed-article:15008812 | pubmed:authorsComplete | Y | lld:pubmed |
| pubmed-article:15008812 | pubmed:pagination | 335-46 | lld:pubmed |
| pubmed-article:15008812 | pubmed:dateRevised | 2006-11-15 | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:meshHeading | pubmed-meshheading:15008812... | lld:pubmed |
| pubmed-article:15008812 | pubmed:year | 2004 | lld:pubmed |
| pubmed-article:15008812 | pubmed:articleTitle | Strain-specific genomic regions of Ruminococcus flavefaciens FD-1 as revealed by combinatorial random-phase genome sequencing and suppressive subtractive hybridization. | lld:pubmed |
| pubmed-article:15008812 | pubmed:affiliation | Department of Animal Sciences, University of Illinois at Urbana-Champaign, 1207 West Gregory Dr, Urbana, IL 61801, USA. | lld:pubmed |
| pubmed-article:15008812 | pubmed:publicationType | Journal Article | lld:pubmed |
| pubmed-article:15008812 | pubmed:publicationType | Research Support, U.S. Gov't, Non-P.H.S. | lld:pubmed |
| http://linkedlifedata.com/r... | pubmed:referesTo | pubmed-article:15008812 | lld:pubmed |
| http://linkedlifedata.com/r... | pubmed:referesTo | pubmed-article:15008812 | lld:pubmed |
| http://linkedlifedata.com/r... | pubmed:referesTo | pubmed-article:15008812 | lld:pubmed |
