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pubmed-article:12456663pubmed:abstractTextArteri-, corona-, toro- and roniviruses are evolutionarily related positive-strand RNA viruses, united in the order Nidovirales. The best studied nidoviruses, the corona- and arteriviruses, employ a unique transcription mechanism, which involves discontinuous RNA synthesis, a process resembling similarity-assisted copy-choice RNA recombination. During infection, multiple subgenomic (sg) mRNAs are transcribed from a mirror set of sg negative-strand RNA templates. The sg mRNAs all possess a short 5' common leader sequence, derived from the 5' end of the genomic RNA. The joining of the non-contiguous 'leader' and 'body' sequences presumably occurs during minus-strand synthesis. To study whether toroviruses use a similar transcription mechanism, we characterized the 5' termini of the genome and the four sg mRNAs of Berne virus (BEV). We show that BEV mRNAs 3-5 lack a leader sequence. Surprisingly, however, RNA 2 does contain a leader, identical to the 5'-terminal 18 residues of the genome. Apparently, BEV combines discontinuous and non-discontinuous RNA synthesis to produce its sg mRNAs. Our findings have important implications for the understanding of the mechanism and evolution of nidovirus transcription.lld:pubmed
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pubmed-article:12456663pubmed:statusMEDLINElld:pubmed
pubmed-article:12456663pubmed:authorpubmed-author:de GrootR JRJlld:pubmed
pubmed-article:12456663pubmed:authorpubmed-author:RottierP J...lld:pubmed
pubmed-article:12456663pubmed:authorpubmed-author:van VlietA...lld:pubmed
pubmed-article:12456663pubmed:authorpubmed-author:SmitsS LSLlld:pubmed
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pubmed-article:12456663pubmed:pagination6571-80lld:pubmed
pubmed-article:12456663pubmed:dateRevised2009-11-18lld:pubmed
pubmed-article:12456663pubmed:articleTitleDiscontinuous and non-discontinuous subgenomic RNA transcription in a nidovirus.lld:pubmed
pubmed-article:12456663pubmed:affiliationInstitute of Virology, Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, 3584 CL Utrecht, The Netherlands.lld:pubmed
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