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pubmed-article:10535945pubmed:abstractTextDouble-stranded RNA deaminase I (ADAR1) contains the Z-DNA binding domain Zalpha. Here we report the solution structure of free Zalpha and map the interaction surface with Z-DNA, confirming roles previously assigned to residues by mutagenesis. Comparison with the crystal structure of the (Zalpha)(2)/Z-DNA complex shows that most Z-DNA contacting residues in free Zalpha are prepositioned to bind Z-DNA, thus minimizing the entropic cost of binding. Comparison with homologous (alpha+beta)helix-turn-helix/B-DNA complexes suggests that binding of Zalpha to B-DNA is disfavored by steric hindrance, but does not eliminate the possibility that related domains may bind to both B- and Z-DNA.lld:pubmed
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pubmed-article:10535945pubmed:articleTitleThe solution structure of the Zalpha domain of the human RNA editing enzyme ADAR1 reveals a prepositioned binding surface for Z-DNA.lld:pubmed
pubmed-article:10535945pubmed:affiliationDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.lld:pubmed
pubmed-article:10535945pubmed:publicationTypeJournal Articlelld:pubmed
pubmed-article:10535945pubmed:publicationTypeResearch Support, U.S. Gov't, P.H.S.lld:pubmed
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