Predicate | Object |
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rdf:type | |
biopax3:comment |
FUNCTION: Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron. SUBUNIT: Identified in the spliceosome C complex. Component of the U11/U12 snRNPs that are part of the U12-type spliceosome. Component of splicing factor SF3B which is composed of at least eight subunits; SF3B1/SAP155/SF3B155, SF3B2/SAP145/SF3B145, SF3B3/SAP130/SF3B130, SF3B4/SAP49/SF3B49, SF3B14A, PHF5A/SF3B14B, SF3B10 and SF3B125. SF3B associates with the splicing factor SF3A and a 12S RNA unit to form the U2 small nuclear ribonucleoproteins complex (U2 snRNP). SF3B2 interacts directly with SF3B4. Interacts with HIV-1 Vpr. SUBCELLULAR LOCATION: Nucleus (By similarity). PTM: Phosphorylated upon DNA damage, probably by ATM or ATR. SIMILARITY: Contains 1 SAP domain. SEQUENCE CAUTION: Sequence=AAA97461.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=AAA97461.1; Type=Frameshift; Positions=28; Sequence=AAH53577.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence; Sequence=BAG61831.1; Type=Erroneous initiation; Note=Translation N-terminally extended; GENE SYNONYMS:SF3B2 SAP145. COPYRIGHT: Protein annotation is derived from the UniProt Consortium (http://www.uniprot.org/). Distributed under the Creative Commons Attribution-NoDerivs License.,
SEQUENCE 895 AA; 100228 MW; D372AFA679443AD6 CRC64;
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biopax3:xref |
urn:biopax:RelationshipXref:HGNC_HGNC:10769,
urn:biopax:RelationshipXref:NCBI GENE_10992,
urn:biopax:RelationshipXref:REFSEQ_NP_006833,
urn:biopax:UnificationXref:UNIPROT_A8K485,
urn:biopax:UnificationXref:UNIPROT_B4DT19,
urn:biopax:UnificationXref:UNIPROT_Q13435,
urn:biopax:UnificationXref:UNIPROT_Q7L4T5,
urn:biopax:UnificationXref:UNIPROT_Q7Z627,
urn:biopax:UnificationXref:UNIPROT_Q969K1,
urn:biopax:UnificationXref:UNIPROT_Q96CM6,
urn:biopax:UnificationXref:UNIPROT_Q9BWD2
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biopax3:displayName |
SF3B2_HUMAN
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biopax3:name |
Pre-mRNA-splicing factor SF3b 145 kDa subunit,
SAP 145,
SF3B2,
SF3b145,
SF3b150,
Spliceosome-associated protein 145
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biopax3:entityFeature |
urn:biopax:ModificationFeature:SF3B2_HUMAN_1,
urn:biopax:ModificationFeature:SF3B2_HUMAN_10,
urn:biopax:ModificationFeature:SF3B2_HUMAN_11,
urn:biopax:ModificationFeature:SF3B2_HUMAN_12,
urn:biopax:ModificationFeature:SF3B2_HUMAN_13,
urn:biopax:ModificationFeature:SF3B2_HUMAN_14,
urn:biopax:ModificationFeature:SF3B2_HUMAN_15,
urn:biopax:ModificationFeature:SF3B2_HUMAN_16,
urn:biopax:ModificationFeature:SF3B2_HUMAN_2,
urn:biopax:ModificationFeature:SF3B2_HUMAN_3,
urn:biopax:ModificationFeature:SF3B2_HUMAN_4,
urn:biopax:ModificationFeature:SF3B2_HUMAN_5,
urn:biopax:ModificationFeature:SF3B2_HUMAN_6,
urn:biopax:ModificationFeature:SF3B2_HUMAN_7,
urn:biopax:ModificationFeature:SF3B2_HUMAN_8,
urn:biopax:ModificationFeature:SF3B2_HUMAN_9
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biopax3:organism | |
biopax3:sequence |
MATEHPEPPKAELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGNREELVERLQSYTRQTGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQPPPPPPPPPPGLGLGFPMAHPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLMQQEERAKQQGDHSLKEHELLEQQKRAAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPRVAAPVGPVGPTPTVLPMGAPVPRPRGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQEEEEMETDARSSLGQSASETEEDTVSVSKKEKNRKRRNRKKKKKPQRVRGVSSESSGDREKDSTRSRGSDSPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAAPKKKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDVTAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREALQEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETRLKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPESCSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSEEEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSETPQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAMTQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
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biopax3:standardName |
Splicing factor 3B subunit 2
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