@prefix activity: <http://linkedlifedata.com/resource/chembl/activity/> .
@prefix address: <http://linkedlifedata.com/resource/clinicaltrials/address/> .
@prefix agency: <http://linkedlifedata.com/resource/clinicaltrials/agency/> .
@prefix assay: <http://linkedlifedata.com/resource/chembl/assay/> .
@prefix assayCategory: <http://linkedlifedata.com/resource/chembl/assayCategory/> .
@prefix assayTargetLink: <http://linkedlifedata.com/resource/chembl/assayTargetLink/> .
@prefix biopax3: <http://www.biopax.org/release/biopax-level3.owl#> .
@prefix calbc: <http://linkedlifedata.com/resource/calbc/> .
@prefix calbc-group: <http://linkedlifedata.com/resource/calbc/group/> .
@prefix carrierLink: <http://linkedlifedata.com/resource/drugbank/carrierLink/> .
@prefix certainAgreement: <http://linkedlifedata.com/resource/clinicaltrials/certainAgreement/> .
@prefix chebi: <http://linkedlifedata.com/resource/chebi/id/> .
@prefix chembl: <http://linkedlifedata.com/resource/chembl/> .
@prefix chemicalCompound: <http://linkedlifedata.com/resource/chembl/compound/> .
@prefix chemicalCompoundRecord: <http://linkedlifedata.com/resource/chembl/chemicalCompoundRecord/> .
@prefix clan: <http://linkedlifedata.com/resource/pfam/clan/> .
@prefix clinicalResult: <http://linkedlifedata.com/resource/clinicaltrials/clinicalResult/> .
@prefix clinicalStudy: <http://linkedlifedata.com/resource/clinicaltrials/study/> .
@prefix clinicaltrials: <http://linkedlifedata.com/resource/clinicaltrials/> .
@prefix company: <http://linkedlifedata.com/resource/chembl/company/> .
@prefix confidenceScore: <http://linkedlifedata.com/resource/chembl/confidenceScore/> .
@prefix contact: <http://linkedlifedata.com/resource/clinicaltrials/contact/> .
@prefix country: <http://linkedlifedata.com/resource/chembl/country/> .
@prefix cpath: <http://cbio.mskcc.org/cpath#> .
@prefix curationLookup: <http://linkedlifedata.com/resource/chembl/curationLookup/> .
@prefix dailymed: <http://www4.wiwiss.fu-berlin.de/dailymed/resource/> .
@prefix dailymed-drugs: <http://www4.wiwiss.fu-berlin.de/dailymed/resource/drugs/> .
@prefix dailymed-ingredient: <http://www4.wiwiss.fu-berlin.de/dailymed/resource/ingredient/> .
@prefix dailymed-instance: <http://www4.wiwiss.fu-berlin.de/dailymed/resource/dailymed/> .
@prefix databaseReference: <http://linkedlifedata.com/resource/pfam/databaseReference/> .
@prefix dc: <http://purl.org/dc/elements/1.1/> .
@prefix dc-term: <http://purl.org/dc/terms/> .
@prefix diseaseontology: <http://linkedlifedata.com/resource/diseaseontology/id/> .
@prefix diseasome: <http://www4.wiwiss.fu-berlin.de/diseasome/resource/> .
@prefix diseasome-diseases: <http://www4.wiwiss.fu-berlin.de/diseasome/resource/diseases/> .
@prefix diseasome-gene: <http://www4.wiwiss.fu-berlin.de/diseasome/resource/genes/> .
@prefix diseasome-instance: <http://www4.wiwiss.fu-berlin.de/diseasome/resource/diseasome/> .
@prefix documentType: <http://linkedlifedata.com/resource/chembl/documentType/> .
@prefix dosageForm: <http://linkedlifedata.com/resource/drugbank/dosageForm/> .
@prefix drug: <http://linkedlifedata.com/resource/drugbank/drug/> .
@prefix drugbank: <http://linkedlifedata.com/resource/drugbank/> .
@prefix drugbank-proteinSequence: <http://linkedlifedata.com/resource/drugbank/proteinSequence/> .
@prefix drugCategory: <http://linkedlifedata.com/resource/drugbank/drugCategory/> .
@prefix drugInteraction: <http://linkedlifedata.com/resource/drugbank/drugInteraction/> .
@prefix drugTarget: <http://linkedlifedata.com/resource/chembl/drugTarget/> .
@prefix eligibility: <http://linkedlifedata.com/resource/clinicaltrials/eligibility/> .
@prefix entrez-gene: <http://linkedlifedata.com/resource/entrezgene/id/> .
@prefix entrez-goterm: <http://linkedlifedata.com/resource/entrezgene/goterm/> .
@prefix entrezgene: <http://linkedlifedata.com/resource/entrezgene/> .
@prefix enzymeLink: <http://linkedlifedata.com/resource/drugbank/enzymeLink/> .
@prefix externalIdentifier: <http://linkedlifedata.com/resource/drugbank/externalIdentifier/> .
@prefix externalLink: <http://linkedlifedata.com/resource/drugbank/externalLink/> .
@prefix factforge: <http://factforge.net/> .
@prefix family: <http://linkedlifedata.com/resource/pfam/family/> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix formulation: <http://linkedlifedata.com/resource/chembl/formulation/> .
@prefix freebase: <http://rdf.freebase.com/ns/> .
@prefix gene-rif: <http://linkedlifedata.com/resource/entrezgene/generif/> .
@prefix geneontology: <http://linkedlifedata.com/resource/geneontology/> .
@prefix geneSequence: <http://linkedlifedata.com/resource/drugbank/geneSequence/> .
@prefix hapmap: <http://linkedlifedata.com/resource/hapmap/> .
@prefix indication: <http://linkedlifedata.com/resource/sider/indication/> .
@prefix intervention: <http://linkedlifedata.com/resource/clinicaltrials/intervention/> .
@prefix investigator: <http://linkedlifedata.com/resource/clinicaltrials/investigator/> .
@prefix label: <http://linkedlifedata.com/resource/sider/label/> .
@prefix lhgdn: <http://linkedlifedata.com/resource/lhgdn/> .
@prefix lifeskim: <http://linkedlifedata.com/resource/lifeskim/> .
@prefix linkedct: <http://data.linkedct.org/resource/linkedct/> .
@prefix linkedct-condition: <http://data.linkedct.org/resource/condition/> .
@prefix linkedct-intervention: <http://data.linkedct.org/resource/intervention/> .
@prefix literatureCitation: <http://linkedlifedata.com/resource/drugbank/citation/> .
@prefix lld: <http://linkedlifedata.com/resource/> .
@prefix location: <http://linkedlifedata.com/resource/clinicaltrials/location/> .
@prefix measurement: <http://linkedlifedata.com/resource/clinicaltrials/measurement/> .
@prefix meddraSideEffect: <http://linkedlifedata.com/resource/sider/meddraSideEffect/> .
@prefix mixture: <http://linkedlifedata.com/resource/drugbank/mixture/> .
@prefix molecularSpecies: <http://linkedlifedata.com/resource/chembl/molecularSpecies/> .
@prefix molecule: <http://linkedlifedata.com/resource/drugbank/molecule/> .
@prefix moleculeType: <http://linkedlifedata.com/resource/chembl/moleculeType/> .
@prefix ontotext: <http://www.ontotext.com/> .
@prefix organismSpecies: <http://linkedlifedata.com/resource/drugbank/organismSpecies/> .
@prefix outcomeAnalysis: <http://linkedlifedata.com/resource/clinicaltrials/outcomeAnalysis/> .
@prefix outcomeMeasure: <http://linkedlifedata.com/resource/clinicaltrials/outcomeMeasure/> .
@prefix overallOfficial: <http://linkedlifedata.com/resource/clinicaltrials/overallOfficial/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix owlim: <http://www.ontotext.com/owlim/> .
@prefix packager: <http://linkedlifedata.com/resource/drugbank/packager/> .
@prefix participantFlow: <http://linkedlifedata.com/resource/clinicaltrials/participantFlow/> .
@prefix patent: <http://linkedlifedata.com/resource/drugbank/patent/> .
@prefix pfam: <http://linkedlifedata.com/resource/pfam/> .
@prefix phenotype: <http://linkedlifedata.com/resource/phenotype/id/> .
@prefix pointOfContact: <http://linkedlifedata.com/resource/clinicaltrials/pointOfContact/> .
@prefix price: <http://linkedlifedata.com/resource/drugbank/price/> .
@prefix primaryOutcome: <http://linkedlifedata.com/resource/clinicaltrials/primaryOutcome/> .
@prefix product: <http://linkedlifedata.com/resource/chembl/informationSource/> .
@prefix property: <http://linkedlifedata.com/resource/drugbank/property/> .
@prefix proteinSequence: <http://linkedlifedata.com/resource/pfam/proteinSequence/> .
@prefix pubmed: <http://linkedlifedata.com/resource/pubmed/> .
@prefix pubmed-article: <http://linkedlifedata.com/resource/pubmed/id/> .
@prefix pubmed-author: <http://linkedlifedata.com/resource/pubmed/author/> .
@prefix pubmed-mesh: <http://linkedlifedata.com/resource/pubmed/mesh/> .
@prefix pubmed-meshheading: <http://linkedlifedata.com/resource/pubmed/meshheading/> .
@prefix pubmed-qualifier: <http://linkedlifedata.com/resource/pubmed/qualifier/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix relationshipType: <http://linkedlifedata.com/resource/chembl/relationshipType/> .
@prefix relontology: <http://linkedlifedata.com/resource/relationontology/> .
@prefix reportingGroup: <http://linkedlifedata.com/resource/clinicaltrials/reportingGroup/> .
@prefix researchStem: <http://linkedlifedata.com/resource/chembl/researchStem/> .
@prefix responsibleParty: <http://linkedlifedata.com/resource/clinicaltrials/responsibleParty/> .
@prefix result: <http://linkedlifedata.com/resource/clinicaltrials/result/> .
@prefix resultsBaseline: <http://linkedlifedata.com/resource/clinicaltrials/resultsBaseline/> .
@prefix resultsMeasure: <http://linkedlifedata.com/resource/clinicaltrials/resultsMeasure/> .
@prefix resultsOutcome: <http://linkedlifedata.com/resource/clinicaltrials/outcome/> .
@prefix secondaryOutcome: <http://linkedlifedata.com/resource/clinicaltrials/secondaryOutcome/> .
@prefix sideEffect: <http://linkedlifedata.com/resource/sider/sideEffect/> .
@prefix sideEffectFrequency: <http://linkedlifedata.com/resource/sider/sideEffectFrequency/> .
@prefix sider: <http://linkedlifedata.com/resource/sider/> .
@prefix sider-drug: <http://linkedlifedata.com/resource/sider/drug/> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix skos-xl: <http://www.w3.org/2008/05/skos-xl#> .
@prefix snp: <http://linkedlifedata.com/resource/hapmap/snp/> .
@prefix structureType: <http://linkedlifedata.com/resource/chembl/structureType/> .
@prefix studyMilestone: <http://linkedlifedata.com/resource/clinicaltrials/studyMilestone/> .
@prefix studyParticipants: <http://linkedlifedata.com/resource/clinicaltrials/studyParticipants/> .
@prefix studyPeriod: <http://linkedlifedata.com/resource/clinicaltrials/studyPeriod/> .
@prefix substructure: <http://linkedlifedata.com/resource/drugbank/substructure/> .
@prefix symptom: <http://linkedlifedata.com/resource/symptom/id/> .
@prefix synonym: <http://linkedlifedata.com/resource/chembl/synonym/> .
@prefix targetLink: <http://linkedlifedata.com/resource/drugbank/targetLink/> .
@prefix targetType: <http://linkedlifedata.com/resource/chembl/targetType/> .
@prefix taxonomy: <http://linkedlifedata.com/resource/drugbank/taxonomy/> .
@prefix taxonomyClass: <http://linkedlifedata.com/resource/drugbank/taxonomyClass/> .
@prefix taxonomyKingdom: <http://linkedlifedata.com/resource/drugbank/taxonomyKingdom/> .
@prefix transporterLink: <http://linkedlifedata.com/resource/drugbank/transporterLink/> .
@prefix umls: <http://linkedlifedata.com/resource/umls/> .
@prefix umls-concept: <http://linkedlifedata.com/resource/umls/id/> .
@prefix umls-label: <http://linkedlifedata.com/resource/umls/label/> .
@prefix umls-semnetwork: <http://linkedlifedata.com/resource/semanticnetwork/id/> .
@prefix uniprot: <http://purl.uniprot.org/core/> .
@prefix uniprot-protein: <http://purl.uniprot.org/uniprot/> .
@prefix uniprot-unstable: <http://linkedlifedata.com/resource/uniprot#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

pubmed-article:15994808 a pubmed:Citation ;
	lifeskim:mentions umls-concept:C0019704 , umls-concept:C0328767 , umls-concept:C1519751 , umls-concept:C0936012 ;
	pubmed:issue "14" ;
	pubmed:dateCreated "2005-7-4" ;
	pubmed:abstractText "Ubiquitin is important for the release of human immunodeficiency virus type 1 (HIV-1) and several other retroviruses, but the functional significance of Gag ubiquitination is unknown. To address this problem, we decided to analyze Gag ubiquitination in detail. A low percentage of the HIV-1 p6 protein has previously been shown to be ubiquitinated, and published mutagenesis data suggested that Gag ubiquitination is largely lost upon mutation of the two lysine residues in p6. In this study, we show that Gag proteins lacking the p6 domain or the two lysine residues within p6 are ubiquitinated at levels comparable to those of the wild-type Gag protein. We detected monoubiquitinated forms of the matrix (MA), capsid (CA), and nucleocapsid (NC) proteins in mature virus preparations. Protease digestion of Gag polyproteins extracted from immature virions indicated that ubiquitinated MA, CA, and possibly NC are as abundant as ubiquitinated p6. The HIV-1 late-domain motifs PTAP and LRSLF were not required for Gag ubiquitination, and mutation of the PTAP motif even resulted in an increase in the amount of Gag-Ub conjugates detected. Finally, at steady state, ubiquitinated Gag proteins were not enriched in either membrane-associated or virus-derived Gag fractions. In summary, these results indicate that HIV-1 Gag can be monoubiquitinated in all domains and that ubiquitination of lysine residues outside p6 may thus contribute to viral release and/or infectivity." ;
	pubmed:commentsCorrections <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11595185> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11562473> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11861830> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11967285> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11991975> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-12101095> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-12559917> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-12610113> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-12832421> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-12915562> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-14505569> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-14505570> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-14519844> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-14581525> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-15063733> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-15140952> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-15140966> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-15163754> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-15367628> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-15473846> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-2014242> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-2161153> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-3016298> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-7474093> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-7474139> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-8068416> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-9525617> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-9813197> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-10954568> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11087859> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11087860> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11087861> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11112487> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11427703> , <http://linkedlifedata.com/resource/pubmed/commentcorrection/15994808-11726971> ;
	pubmed:language "eng" ;
	pubmed:journal <http://linkedlifedata.com/resource/pubmed/journal/0113724> ;
	pubmed:citationSubset "IM" ;
	pubmed:chemical <http://linkedlifedata.com/resource/pubmed/chemical/Lysine> , <http://linkedlifedata.com/resource/pubmed/chemical/Gene+Products%2C+gag> , <http://linkedlifedata.com/resource/pubmed/chemical/Ubiquitin> ;
	pubmed:status "MEDLINE" ;
	pubmed:month "Jul" ;
	pubmed:issn "0022-538X" ;
	pubmed:author <http://linkedlifedata.com/resource/pubmed/author/Kr%C3%A4usslichHans-GeorgHG> , pubmed-author:GottweinEvaE ;
	pubmed:issnType "Print" ;
	pubmed:volume "79" ;
	pubmed:owner "NLM" ;
	pubmed:authorsComplete "Y" ;
	pubmed:pagination "9134-44" ;
	pubmed:dateRevised "2009-11-18" ;
	pubmed:meshHeading pubmed-meshheading:15994808-Humans , pubmed-meshheading:15994808-Mutation , pubmed-meshheading:15994808-Lysine , <http://linkedlifedata.com/resource/pubmed/meshheading/15994808-Cell+Line> , pubmed-meshheading:15994808-Virion , <http://linkedlifedata.com/resource/pubmed/meshheading/15994808-Amino+Acid+Motifs> , <http://linkedlifedata.com/resource/pubmed/meshheading/15994808-Gene+Products%2C+gag> , pubmed-meshheading:15994808-HIV-1 , pubmed-meshheading:15994808-Ubiquitin ;
	pubmed:year "2005" ;
	pubmed:articleTitle "Analysis of human immunodeficiency virus type 1 Gag ubiquitination." ;
	pubmed:affiliation "Abteilung Virologie, Im Neuenheimer Feld 324, 69120 Heidelberg, Germany." ;
	pubmed:publicationType "Journal Article" , "Research Support, Non-U.S. Gov't" .
