Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
1
pubmed:dateCreated
2004-6-30
pubmed:abstractText
Here we report that the OX-TES-1 SEREX antigen, which showed immunological reactivity with serum from four out of 10 diffuse large B-cell lymphoma (DLBCL) patients, is encoded by a novel gene, PAS domain containing 1 (PASD1). PASD1_v1 cDNA encodes a 639 amino-acid (aa) protein product, while an alternatively spliced variant (PASD1_v2), lacking intron 14, encodes a 773 aa protein, the first 638 aa of which are common to both proteins. The PASD1-predicted protein contains a PAS domain that, together with a putative leucine zipper and nuclear localisation signal, suggests it encodes a transcription factor. The expression of PASD1_v1 mRNA was confirmed by RT-PCR in seven DLBCL-derived cell lines, while PASD1_v2 mRNA appears to be preferentially expressed in cell lines derived from non-germinal centre DLBCL. Immunophenotyping studies of de novo DLBCL patients' tumours with antibodies to CD10, BCL-6 and MUM1 indicated that two patients mounting an immune response to PASD1 were of a poor prognosis non-germinal centre subtype. Expression of PASD1 mRNA was restricted to normal testis, while frequent expression was observed in solid tumours (25 out of 68), thus fulfilling the criteria for a novel cancer testis antigen. PASD1 has potential for lymphoma vaccine development that may also be widely applicable to other tumour types.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-10211784, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-10231388, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-10361135, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-10370792, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-10676951, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-11205492, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-11533070, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-11673653, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-11914181, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-12019181, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-12075054, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-12439611, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-12445278, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-12445280, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-12446832, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-12480531, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-12538465, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-14504078, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-14593720, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-15122589, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-1840703, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-3681984, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-7472772, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-7613088, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-8340755, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-8501979, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-9166827, http://linkedlifedata.com/resource/pubmed/commentcorrection/15162151-9808623
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jul
pubmed:issn
0007-0920
pubmed:author
pubmed:issnType
Print
pubmed:day
5
pubmed:volume
91
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
141-9
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:15162151-Amino Acid Sequence, pubmed-meshheading:15162151-Antibody Formation, pubmed-meshheading:15162151-Antigens, Neoplasm, pubmed-meshheading:15162151-Cancer Vaccines, pubmed-meshheading:15162151-DNA, Complementary, pubmed-meshheading:15162151-Gene Expression Profiling, pubmed-meshheading:15162151-Humans, pubmed-meshheading:15162151-Immunohistochemistry, pubmed-meshheading:15162151-Immunophenotyping, pubmed-meshheading:15162151-Lymphoma, B-Cell, pubmed-meshheading:15162151-Lymphoma, Large B-Cell, Diffuse, pubmed-meshheading:15162151-Male, pubmed-meshheading:15162151-Molecular Sequence Data, pubmed-meshheading:15162151-Neoplasm Proteins, pubmed-meshheading:15162151-Prognosis, pubmed-meshheading:15162151-Protein-Serine-Threonine Kinases, pubmed-meshheading:15162151-RNA, Messenger, pubmed-meshheading:15162151-Reverse Transcriptase Polymerase Chain Reaction, pubmed-meshheading:15162151-Testis
pubmed:year
2004
pubmed:articleTitle
A novel diffuse large B-cell lymphoma-associated cancer testis antigen encoding a PAS domain protein.
pubmed:affiliation
Nuffield Department of Clinical Laboratory Sciences, University of Oxford, LRF Immunodiagnostics Unit, Level 4 Academic Block, John Radcliffe Hospital, Oxford, Oxfordshire OX3 9DU, UK. amanda.liggins@ndcls.ox.ac.uk
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't