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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
13
pubmed:dateCreated
2011-3-30
pubmed:abstractText
Autosomal recessive juvenile parkinsonism (ARJP) is an early onset familial form of Parkinson's disease. Approximately 50% of all ARJP cases are attributed to mutations in the gene park2, coding for the protein parkin. Parkin is a multidomain E3 ubiquitin ligase with six distinct domains including an N-terminal ubiquitin-like (Ubl) domain. In this work we examined the structure, stability, and interactions of the parkin Ubl domain containing most ARJP causative mutations. Using NMR spectroscopy we show that the Ubl domain proteins containing the ARJP substitutions G12R, D18N, K32T, R33Q, P37L, and K48A retained a similar three-dimensional fold as the Ubl domain, while at least one other (V15M) had altered packing. Four substitutions (A31D, R42P, A46P, and V56E) result in poor folding of the domain, while one protein (T55I) showed evidence of heterogeneity and aggregation. Further, of the substitutions that maintained their three-dimensional fold, we found that four of these (V15M, K32T, R33Q, and P37L) lead to impaired function due to decreased ability to interact with the 19S regulatory subunit S5a. Three substitutions (G12R, D18N, and Q34R) with an uncertain role in the disease did not alter the three-dimensional fold or S5a interaction. This work provides the first extensive characterization of the structural effects of causative mutations within the ubiquitin-like domain in ARJP.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-10888878, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-11078524, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-11222788, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-11431533, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-11590439, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-11827521, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-12634850, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-12652124, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-12814656, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-12930822, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-12970176, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-15318002, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-15606901, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-15816865, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-16049031, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-16500134, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-16687518, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-16714300, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-16793319, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-16862145, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-17360614, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-18004887, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-18061150, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-18485927, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-18486522, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-19339245, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-19348700, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-19875440, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-20064468, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-20187240, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-20457763, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-20506312, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-20810900, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-20823226, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-21209200, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-2314256, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-3041007, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-3689874, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-8520220, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-8535251, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-8910518, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-9385638, http://linkedlifedata.com/resource/pubmed/commentcorrection/21348451-9560156
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Apr
pubmed:issn
1520-4995
pubmed:author
pubmed:issnType
Electronic
pubmed:day
5
pubmed:volume
50
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2603-10
pubmed:dateRevised
2011-7-27
pubmed:meshHeading
pubmed-meshheading:21348451-Humans, pubmed-meshheading:21348451-Temperature, pubmed-meshheading:21348451-Parkinsonian Disorders, pubmed-meshheading:21348451-Kinetics, pubmed-meshheading:21348451-Protein Denaturation, pubmed-meshheading:21348451-RNA, Ribosomal, pubmed-meshheading:21348451-Circular Dichroism, pubmed-meshheading:21348451-Protein Stability, pubmed-meshheading:21348451-Protein Structure, Tertiary, pubmed-meshheading:21348451-Nuclear Magnetic Resonance, Biomolecular, pubmed-meshheading:21348451-Recombinant Proteins, pubmed-meshheading:21348451-Ubiquitin-Protein Ligases, pubmed-meshheading:21348451-Amino Acid Substitution, pubmed-meshheading:21348451-Proteasome Endopeptidase Complex, pubmed-meshheading:21348451-Mutant Proteins, pubmed-meshheading:21348451-Protein Unfolding, pubmed-meshheading:21348451-Protein Interaction Domains and Motifs, pubmed-meshheading:21348451-Protein Refolding
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