Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
3
pubmed:dateCreated
2010-9-9
pubmed:abstractText
In this study, we have developed a SYBR Green I-based real-time multiplexed PCR assay for the detection of Vibrio parahaemolyticus in Gulf of Mexico water (gulf water), artificially seeded and natural oysters targeting three hemolysin genes, tlh, tdh and trh in a single reaction. Post-amplification melt-temperature analysis confirmed the amplification of all three targeted genes with high specificity. The detection sensitivity was 10 cfu (initial inoculum) in 1 ml of gulf water or oyster tissue homogenate, following 5 h enrichment. The results showed 58% of the oysters to be positive for tlh, indicating the presence of V. parahaemolyticus; of which 21% were positive for tdh; and 0.7% for trh, signifying the presence of pathogenic strains. The C(t) values showed that oyster tissue matrix had some level of inhibition, whereas the gulf water had negligible effect on PCR amplification. The assay was rapid (approximately 8 h), specific and sensitive, meeting the ISSC guidelines. Rapid detection using real-time multiplexed PCR will help reduce V. parahaemolyticus-related disease outbreaks, thereby increasing consumer confidence and economic success of the seafood industry.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Oct
pubmed:issn
1572-9699
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
98
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
279-90
pubmed:meshHeading
pubmed-meshheading:20376562-Animals, pubmed-meshheading:20376562-Atlantic Ocean, pubmed-meshheading:20376562-Bacterial Proteins, pubmed-meshheading:20376562-Bacterial Toxins, pubmed-meshheading:20376562-DNA, Bacterial, pubmed-meshheading:20376562-DNA Probes, pubmed-meshheading:20376562-Food Microbiology, pubmed-meshheading:20376562-Genes, Bacterial, pubmed-meshheading:20376562-Hemolysin Proteins, pubmed-meshheading:20376562-Humans, pubmed-meshheading:20376562-In Situ Hybridization, pubmed-meshheading:20376562-Organic Chemicals, pubmed-meshheading:20376562-Ostreidae, pubmed-meshheading:20376562-Polymerase Chain Reaction, pubmed-meshheading:20376562-Seawater, pubmed-meshheading:20376562-Sensitivity and Specificity, pubmed-meshheading:20376562-Shellfish, pubmed-meshheading:20376562-Vibrio parahaemolyticus
pubmed:year
2010
pubmed:articleTitle
Multiplexed real-time PCR amplification of tlh, tdh and trh genes in Vibrio parahaemolyticus and its rapid detection in shellfish and Gulf of Mexico water.
pubmed:affiliation
Department of Biology, University of Alabama at Birmingham, Birmingham, AL 35294-1179, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S., Research Support, Non-U.S. Gov't