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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
4
pubmed:dateCreated
2010-4-26
pubmed:abstractText
Drebrin is a filament-binding protein involved in organizing the dendritic pool of actin. Previous in vivo studies identified the actin-binding domain of drebrin (DrABD), which causes the same rearrangements in the cytoskeleton as the full-length protein. Site-directed mutagenesis, electron microscopic reconstruction, and chemical cross-linking combined with mass spectrometry analysis were employed here to map the DrABD binding interface on actin filaments. DrABD could be simultaneously attached to two adjacent actin protomers using the combination of 2-iminothiolane (Traut's reagent) and MTS1 [1,1-methanediyl bis(methanethiosulfonate)]. Site-directed mutagenesis combined with chemical cross-linking revealed that residue 238 of DrABD is located within 5.4 A from C374 of actin protomer 1 and that native cysteine 308 of drebrin is near C374 of actin protomer 2. Mass spectrometry analysis revealed that a zero-length cross-linker, 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide, can link the N-terminal G-S extension of the recombinant DrABD to E99 and/or E100 on actin. Efficient cross-linking of drebrin residues 238, 248, 252, 270, and 271 to actin residue 51 was achieved with reagents of different lengths (5.4-19 A). These results suggest that the "core" DrABD is centered on actin subdomain 2 and may adopt a folded conformation upon binding to F-actin. The results of electron microscopic reconstruction, which are in a good agreement with the cross-linking data, revealed polymorphism in DrABD binding to F-actin and suggested the existence of two binding sites. These results provide new structural insight into the previously observed competition between drebrin and several other F-actin-binding proteins.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-10093212, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-10234022, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-10423443, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-10585290, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-10600563, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-10637315, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-11125866, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-11278830, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-11285275, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-11311400, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-11675932, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-11956227, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-12507467, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-12761245, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-14508495, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-15041668, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-15264254, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-16415866, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-16452483, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-16461379, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-17379343, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-17543276, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-17590478, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-18258262, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-18463136, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-18588530, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-18625842, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-18762352, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-18829961, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-19341744, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-2395461, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-4254541, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-7961990, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-8034744, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-8107884, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-8413665, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-8576116, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-8769857, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-8779443, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-8929425, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-8987991, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-9009191, http://linkedlifedata.com/resource/pubmed/commentcorrection/20347847-9265645
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
1089-8638
pubmed:author
pubmed:copyrightInfo
(c) 2010 Elsevier Ltd. All rights reserved.
pubmed:issnType
Electronic
pubmed:day
14
pubmed:volume
398
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
542-54
pubmed:dateRevised
2011-7-28
pubmed:meshHeading
pubmed:year
2010
pubmed:articleTitle
Mapping of drebrin binding site on F-actin.
pubmed:affiliation
Department of Chemistry and Biochemistry, University of California, Los Angeles, CA 90095, USA.
pubmed:publicationType
Journal Article
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