Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
5
pubmed:dateCreated
2008-1-29
pubmed:abstractText
Human tear lipocalin (TL) exhibits diverse functions, most of which are linked to ligand binding. To map the binding site of TL for some amphiphilic ligands, we capitalized on the hydrophobic and hydrophilic properties of 8-anilino-1-naphthalenesulfonic acid (ANS). In single Trp mutants, resonance energy transfer from Trp to ANS indicates that the naphthalene group of ANS is proximate to Leu105 in the cavity. Binding energies of TL to ANS and its analogues reveal contributions from electrostatic interactions. The sulfonate group of ANS interacts strongly with the nonconserved intracavitary residue Lys114 and less with neighboring residues His84 and Glu34. This trigonal cluster of residues may play a role in the ligand recognition site for some negatively charged ligands. Because many drugs possess sulfonate groups, the trigonal cluster-sulfonate interaction can also be exploited as a lipocalin-based drug delivery mechanism. The binding of lauric acid and its analogues shows that fatty acids assume heterogeneous orientations in the cavity of TL. Predominantly, the hydrocarbon tail is buried in the cavity of TL and the carboxyl group is oriented toward the mouth. However, TL can also interact, albeit relatively weakly, with fatty acids oriented in the opposite direction. As the major lipid binding protein of tears, the ability to accommodate fatty acids in two opposing orientations may have functional implications for TL. At the aqueous-lipid interface, fatty acids whose carboxyl groups are positioned toward the aqueous phase are available for interaction with TL that could augment stability of the tear film.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-10407141, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-10515687, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-10521278, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-10547298, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-10586930, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-10607840, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-10716184, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-10769187, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-11058765, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-11058774, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-11336644, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-11688717, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-11732894, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-11850445, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-12613961, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-12613963, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-12876309, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-1400345, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-15106912, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-15106913, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-15461462, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-15489503, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-16006106, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-16186338, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-16236563, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-16546182, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-16614238, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-17321809, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-17694446, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-17945179, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-18028215, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-4067517, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-4591332, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-5119250, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-7067743, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-7648862, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-7679926, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-7805627, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-8053542, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-8306712, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-8537027, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-8761444, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-8999869, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-9296605, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-9345294, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-9440164, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-945163, http://linkedlifedata.com/resource/pubmed/commentcorrection/18179255-9485367
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Feb
pubmed:issn
0006-2960
pubmed:author
pubmed:issnType
Print
pubmed:day
5
pubmed:volume
47
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1414-24
pubmed:dateRevised
2011-9-26
pubmed:meshHeading
pubmed:year
2008
pubmed:articleTitle
Ligand binding site of tear lipocalin: contribution of a trigonal cluster of charged residues probed by 8-anilino-1-naphthalenesulfonic acid.
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