Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
31
pubmed:dateCreated
2007-8-1
pubmed:abstractText
Duplication of opsin genes has a crucial role in the evolution of visual system. Zebrafish have four green-sensitive (RH2) opsin genes (RH2-1, RH2-2, RH2-3, and RH2-4) arrayed in tandem. They are expressed in the short member of the double cones (SDC) but differ in expression areas in the retina and absorption spectra of their encoding photopigments. The shortest and the second shortest wavelength subtypes, RH2-1 and RH2-2, are expressed in the central-to-dorsal retina. The longer wavelength subtype, RH2-3, is expressed circumscribing the RH2-1/RH2-2 area, and the longest subtype, RH2-4, is expressed further circumscribing the RH2-3 area and mainly occupying the ventral retina. The present report shows that a 0.5-kb region located 15 kb upstream of the RH2 gene array is an essential regulator for their expression. When the 0.5-kb region was deleted from a P1-artificial chromosome (PAC) clone encompassing the four RH2 genes and when one of these genes was replaced with a reporter GFP gene, the GFP expression in SDCs was abolished in the zebrafish to which a series of the modified PAC clones were introduced. Transgenic studies also showed that the 0.5-kb region conferred the SDC-specific expression for promoters of a non-SDC (UV opsin) and a nonretinal (keratin 8) gene. Changing the location of the 0.5-kb region in the PAC clone conferred the highest expression for its proximal gene. The 0.5-kb region was thus designated as RH2-LCR analogous to the locus control region of the L-M opsin genes of primates.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-10220452, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-10319869, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-10349976, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-10785616, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-11352566, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-11773636, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-11836785, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-12351173, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-12395387, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-12618404, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-1409688, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-14550552, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-14593185, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-14966125, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-1524826, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-15366023, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-15558491, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-15647516, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-15781894, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-16237171, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-16961970, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-1894769, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-2225071, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-2788922, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-8223636, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-9211424, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-9390516, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-9390562, http://linkedlifedata.com/resource/pubmed/commentcorrection/17646658-9598983
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jul
pubmed:issn
0027-8424
pubmed:author
pubmed:issnType
Print
pubmed:day
31
pubmed:volume
104
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
12813-8
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2007
pubmed:articleTitle
Identification of a locus control region for quadruplicated green-sensitive opsin genes in zebrafish.
pubmed:affiliation
Department of Integrated Biosciences, Graduate School of Frontier Sciences, University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8562, Japan.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't