Source:http://linkedlifedata.com/resource/pubmed/id/17463025
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
12
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pubmed:dateCreated |
2007-7-9
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pubmed:abstractText |
Since many important biological systems or processes are dynamic systems, it is important to study the gene expression patterns over time in a genomic scale in order to capture the dynamic behavior of gene expression. Microarray technologies have made it possible to measure the gene expression levels of essentially all the genes during a given biological process. In order to determine the transcriptional factors (TFs) involved in gene regulation during a given biological process, we propose to develop a functional response model with varying coefficients in order to model the transcriptional effects on gene expression levels and to develop a group smoothly clipped absolute deviation (SCAD) regression procedure for selecting the TFs with varying coefficients that are involved in gene regulation during a biological process.
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pubmed:grant | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Jun
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pubmed:issn |
1367-4811
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pubmed:author | |
pubmed:issnType |
Electronic
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pubmed:day |
15
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pubmed:volume |
23
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
1486-94
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pubmed:dateRevised |
2009-11-4
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pubmed:meshHeading |
pubmed-meshheading:17463025-Cell Cycle,
pubmed-meshheading:17463025-Chromatin Immunoprecipitation,
pubmed-meshheading:17463025-Computer Simulation,
pubmed-meshheading:17463025-Gene Expression,
pubmed-meshheading:17463025-Gene Expression Regulation,
pubmed-meshheading:17463025-Oligonucleotide Array Sequence Analysis,
pubmed-meshheading:17463025-Regression Analysis,
pubmed-meshheading:17463025-Saccharomyces cerevisiae,
pubmed-meshheading:17463025-Time Factors,
pubmed-meshheading:17463025-Transcription Factors
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pubmed:year |
2007
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pubmed:articleTitle |
Group SCAD regression analysis for microarray time course gene expression data.
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pubmed:affiliation |
Department of Biostatistics and Epidemiology, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
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pubmed:publicationType |
Journal Article,
Research Support, N.I.H., Extramural
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