rdf:type |
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lifeskim:mentions |
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pubmed:issue |
2
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pubmed:dateCreated |
1999-7-12
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pubmed:databankReference |
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pubmed:abstractText |
The rRNA methyltransferase ErmC' transfers methyl groups from S -adenosyl-l-methionine to atom N6 of an adenine base within the peptidyltransferase loop of 23 S rRNA, thus conferring antibiotic resistance against a number of macrolide antibiotics. The crystal structures of ErmC' and of its complexes with the cofactor S -adenosyl-l-methionine, the reaction product S-adenosyl-l-homocysteine and the methyltransferase inhibitor Sinefungin, respectively, show that the enzyme undergoes small conformational changes upon ligand binding. Overall, the ligand molecules bind to the protein in a similar mode as observed for other methyltransferases. Small differences between the binding of the amino acid parts of the different ligands are correlated with differences in their chemical structure. A model for the transition-state based on the atomic details of the active site is consistent with a one-step methyl-transfer mechanism and might serve as a first step towards the design of potent Erm inhibitors.
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pubmed:language |
eng
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pubmed:journal |
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pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Adenosine,
http://linkedlifedata.com/resource/pubmed/chemical/Antifungal Agents,
http://linkedlifedata.com/resource/pubmed/chemical/Ligands,
http://linkedlifedata.com/resource/pubmed/chemical/Methyltransferases,
http://linkedlifedata.com/resource/pubmed/chemical/RNA, Ribosomal, 23S,
http://linkedlifedata.com/resource/pubmed/chemical/S-Adenosylhomocysteine,
http://linkedlifedata.com/resource/pubmed/chemical/S-Adenosylmethionine,
http://linkedlifedata.com/resource/pubmed/chemical/rRNA...,
http://linkedlifedata.com/resource/pubmed/chemical/sinefungin
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pubmed:status |
MEDLINE
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pubmed:month |
Jun
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pubmed:issn |
0022-2836
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pubmed:author |
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pubmed:copyrightInfo |
Copyright 1999 Academic Press.
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pubmed:issnType |
Print
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pubmed:day |
4
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pubmed:volume |
289
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
277-91
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pubmed:dateRevised |
2009-11-19
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pubmed:meshHeading |
pubmed-meshheading:10366505-Adenosine,
pubmed-meshheading:10366505-Amino Acid Sequence,
pubmed-meshheading:10366505-Antifungal Agents,
pubmed-meshheading:10366505-Bacillus subtilis,
pubmed-meshheading:10366505-Binding Sites,
pubmed-meshheading:10366505-Crystallography, X-Ray,
pubmed-meshheading:10366505-Drug Resistance, Microbial,
pubmed-meshheading:10366505-Ligands,
pubmed-meshheading:10366505-Methyltransferases,
pubmed-meshheading:10366505-Models, Molecular,
pubmed-meshheading:10366505-Molecular Sequence Data,
pubmed-meshheading:10366505-Protein Conformation,
pubmed-meshheading:10366505-Protein Structure, Secondary,
pubmed-meshheading:10366505-RNA, Ribosomal, 23S,
pubmed-meshheading:10366505-S-Adenosylhomocysteine,
pubmed-meshheading:10366505-S-Adenosylmethionine
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pubmed:year |
1999
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pubmed:articleTitle |
The 2.2 A structure of the rRNA methyltransferase ErmC' and its complexes with cofactor and cofactor analogs: implications for the reaction mechanism.
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pubmed:affiliation |
Abbott Laboratories, D46Y-AP 10, 100 Abbott Park Road, Abbott Park, IL, 60064, USA. gerd.schluckebier@abbott.com
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pubmed:publicationType |
Journal Article
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